Summer research in computational biology
This position has been closed, it is visible for archival purposes.
Posts by Tag
- jobs 2
- R 1
- Python 1
- compression 1
- Pbgzip 1
- Pyfaidx 1
- bioinformatics 1
- biosecurity 1
- cyberbiosecurity 1
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jobs
Computational Biology postdoc position
This position has been filled, it is visible for archival purposes.
R
Tips on speeding up R
An ARS scientist asked me about ways to speed up his work in R last week, so I thought I would post my answer here.
Python
Efficient random access of Fasta data with Pyfaidx and pbgzip
There are often times in bioinformatics when I find myself needing to sample large fasta files randomly. RefSeq is currently about 250GB compressed; this is ...
compression
Efficient random access of Fasta data with Pyfaidx and pbgzip
There are often times in bioinformatics when I find myself needing to sample large fasta files randomly. RefSeq is currently about 250GB compressed; this is ...
Pbgzip
Efficient random access of Fasta data with Pyfaidx and pbgzip
There are often times in bioinformatics when I find myself needing to sample large fasta files randomly. RefSeq is currently about 250GB compressed; this is ...
Pyfaidx
Efficient random access of Fasta data with Pyfaidx and pbgzip
There are often times in bioinformatics when I find myself needing to sample large fasta files randomly. RefSeq is currently about 250GB compressed; this is ...
bioinformatics
Cyberbiosecurity
Our Office of National Programs at the USDA-ARS recently sent around an article from Perccoud et al. (2018) on the risks to data and computer systems from se...
biosecurity
Cyberbiosecurity
Our Office of National Programs at the USDA-ARS recently sent around an article from Perccoud et al. (2018) on the risks to data and computer systems from se...
cyberbiosecurity
Cyberbiosecurity
Our Office of National Programs at the USDA-ARS recently sent around an article from Perccoud et al. (2018) on the risks to data and computer systems from se...
Artificial intelligence
AI for Agriculture
To understand the impact of Artificial intelligence on Agriculture it is important to put it in the context of larger economic changes in agriculture. Since ...
Machine learning
AI for Agriculture
To understand the impact of Artificial intelligence on Agriculture it is important to put it in the context of larger economic changes in agriculture. Since ...
agriculture
AI for Agriculture
To understand the impact of Artificial intelligence on Agriculture it is important to put it in the context of larger economic changes in agriculture. Since ...
closed
Summer research in computational biology
This position has been closed, it is visible for archival purposes.
news
Back to top ↑CKDu
Thoughts on the silica hypothesis as a cause of Chronic kidney disease of unknown etiology (CKDu)
Chronic kidney disease of unknown etiology is a devastating form of kidney disease that strikes primarily young agricultural workers working in sugarcane and...
silica
Thoughts on the silica hypothesis as a cause of Chronic kidney disease of unknown etiology (CKDu)
Chronic kidney disease of unknown etiology is a devastating form of kidney disease that strikes primarily young agricultural workers working in sugarcane and...
sugarcane
Thoughts on the silica hypothesis as a cause of Chronic kidney disease of unknown etiology (CKDu)
Chronic kidney disease of unknown etiology is a devastating form of kidney disease that strikes primarily young agricultural workers working in sugarcane and...
nanoparticles
Thoughts on the silica hypothesis as a cause of Chronic kidney disease of unknown etiology (CKDu)
Chronic kidney disease of unknown etiology is a devastating form of kidney disease that strikes primarily young agricultural workers working in sugarcane and...